YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30265294, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICTMGLGY IGLPTSAMFA KYGTEVVGVD IHQKVVDKLN NGEIHIEEPG LGEVVKEVVA  60
   61 NGKFRASLTP EEADAFIISV PTPNHDDEHK SCDLSYVLTA TEKVLPFVKK GNVIIVESTI 120
  121 APRSMDDYVK PLVEEAGFTV GEDIYLVHCP ERVLPGQILH ELVHNNRIVG GVTPACAEAG 180
  181 ARVYGVFVEG EIIKTNAKTA EMSKLMENTF RDVNIALANE LTKVCNSLDI NVLDVIEMAN 240
  241 KHPRVNLHYP GPGVGGHCLA VDPYFIVAKA PELANIIKLS RETNVSMPHY VTEKVKELLA 300
  301 GVENPKVAAF GVTYKGNVDD MRESPAMDVI DLIRNEGITV SAHDPHVESD FFELHSAEEA 360
  361 VKDAHLILVL TDHDEFKTMN YDSLAPYMAK TVVFDTRNCV QAVSTGEMKI INFGTLYEAL 420
  421 NKNVMMV

Type	Start	End	Confidence
Signal Peptide	1	17	0.54
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	427	0.99