YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30258169, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKMKKFTA VVAPVLAMSV ALTACSGSGG EKKSTTTSSG GGEEKKSEIK YAAKQVLNRT  60
   61 ENQEIPTMDV SKSTDTLGSQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR 120
  121 KDAKWSNGDP VTAKDFVYAW QRLLDKNTAA EYAFIAYYIK NAEAINKGEK PLTDLGAKAV 180
  181 DDYTLEVELE KPVPYFLNLM AFPSYYPLNE KFVKEKGDKF GLEADTTLYN GPFVMASWKH 240
  241 EQGWQLKKND KYWDNKTVKL EEINYSVVKE VATKVNLYDT GSIDFTLLSG EFVDKYKSNK 300
  301 EEYGEYSEAS TFFLRLNQKR NGQDTPLKSK KLREAIALSI DKKGLATVIL NNGSKATDQL 360
  361 VPKGLATGPD GKDYQDTFKN GLKYDPKKGA AAWEEAKKEL GKDQVTIELL SYDDGTAKKI 420
  421 ADYFKDQIEK NLKGVTVNTK IQPFKQKLKL ESAQDYEVSF AGWSPDYSDP MTFIDMFESK 480
  481 SPYNQMSYSN PKYDEMVAKA GNELLSDPKK RWETLGKAEK LFLEEDAGLV PLYQTGRAYV 540
  541 MKPNVKGIVK HNISPEYSFK WAYVTEGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle