YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30257983, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLVIGIM YTMFFLIGNI HLHADERTNV KEITSLEEPT WIFQAGISKG KYHDRQDLGF  60
   61 ILQRNTPLKV RQTNPNFKDK LTVRLLSNDS KNEKSIQVGN EWITIQGDTP LVPFIDTPYG 120
  121 EEPALLEYQV GNESATKPLP IYKQQGSVSQ FFSTWDQFDG EYALIQGESF QLFIPKKDKE 180
  181 LVRSLKDFQS LDELIAYYED IFAMYDSIIG LDGSTVENKK SQNRYFLKAD ISGAGGAYYG 240
  241 ANWTANSTDS TKMWLDKLSW GTLHEIAHGY QAGFDNQGIF TGEVSNNLFG VQYQYSKYGK 300
  301 KADQVGWLFN FGKKEQVERN LYNALMKENK NYDDLDLRQK LILLTMAKQK AGDEAFAKMY 360
  361 QGYRKLASNA AFKKGDHSLP DLMNQYYSEN VQVDFTPVFE RWGFKLNHKQ IEMNRAKGYP 420
  421 AVTSLAYIVP ESQLAKARAL VDPDIPINSN FEIVRNQQIA SLGLKGNLHI HLNTNEIDTL 480
  481 KGGKIKLKEG NTVIQEKTIE TADINLQDVP NGIYTVEISG GKTDSMYHFS TYYAYVKEKD 540
  541 NSLTIDVNEM KVSNLVNETI QFLGLGDDQF AELNTDLEQE RAVFTVTTKT PHSYYAGEKY 600
  601 ASIELFNEKG EKIYTKEMEG TNVTVVKDII PLKEGYRIKI YHDEVKKRLT SKATIINPMN 660
  661 KTNEIIMTKW GLKNTYLKNN PEENLMKRID EEMEVIISNP LLKEIPMQKL EMKKNVWMAI 720
  721 NMLSEPQKIT YINKYKDSLY NE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle