YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30257283, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIYIVTII CTFIVLGTFI FHKVNELKYT KAINQSNHIK NIAHRGASAY APEHTIAAYK  60
   61 LGQQLKGDYI EIDLQMTKDG HLVAMHDETV NRTTNGTGLV KEHTLEELKQ LNAGSTYNKK 120
  121 YPNLAKKEYE NAKVPTLEEV IEVFGHDANY YIETKSPDEY PGMEEKLLEI INHYEIQDKV 180
  181 IIQSFSEVSL QKLHSLHVNI PLAQLLSYKK AVQLTESEIK KYKTYCIGLG MNYKYIDAAY 240
  241 VKRIKKHGLE VHPFTVDNET DMKKLILWGV DGMFTNYPDR LYSLLKS

Type	Start	End	Confidence
Cytoplasmic	1	4	0.35
Transmembrane Helix	5	22	0.48
Non-Cytoplasmic	23	287	0.88