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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30257265, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKLQTNKGA RYFMIAFIVL FLIMLLRFFY IQAVGVVHNV NVKDLATEQH NKNGILEANR  60
   61 GTIYDQAGKV LVQDSTTYRV VVNLKGNGKL KNKDETAAQL ADALEINKED VLKNFHEGRT 120
  121 QVEIGKVGRN LTREKKEQIR KLKIPGVSFM PEKARVYPNE DFASYILGFA RPDDKGNTEG 180
  181 KFGLEKSLDK YLRSTNGNIE YVGGRGGIPL TNDIGKIEPA KHGNNVYLTL DKQINSFLEE 240
  241 AMNKAQDHYD PSMLLGIIAD PKTGKVLAMS SKPSFNPNKG DIEYFLNDPI ANAYEPGSTM 300
  301 KVFTLAAAIN EGVYNGKEYF QSGKYAVGSS DIKDHNGGFG WGSITFDEGF ERSSNVAFSI 360
  361 LEDQLLKPNK FKQYMNKFGF NQKTGIDLPG ESKNTLLLNT QIQQVTTSFG QGSTVTPIQL 420
  421 IQAATAIAND GKMMQPYIVD KVVNPTNKQV IMENQPKEIG NPIKKETADK VRDLMERVIT 480
  481 SSKGTGTMYK VDGYPIGGKT GTAQIPNPEN GRYMEGKENY IFSFLGMAPI DDPELIVYLA 540
  541 IKQPKLKGDE YGAQPLAEIF KPVVKNSLEY LKVRPYTEKQ MADATEKSQL KVQNYVNQSM 600
  601 GTVENNVKKE KLQPITLGEG KIIKQYPQSG EVMSEGDRIF LLGKNATMPN LQGWSMRDVM 660
  661 YFSKLLKLDL KTSGTGYVTS QSIKKGQAIQ EGDVLELELE PPLQPLTEAN TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle