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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30254848, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFLQNLKVK YKLLSLISLA VLGMVIMSYV AIQSINKIKQ NTEVVVDDYQ YSTILLEGML  60
   61 RTQNSLEYNL LELITTSQNE GTNKEEIIDN IEKDLKKYDS LLKEYDDGFN LSKQEDELFQ 120
  121 EMKKSLPIYM GTYKKLFEKA KVKNESQMVN EFQKELKPRG VELAGYAVDL ESYVSNLADQ 180
  181 VFNDSQKMID RSVITFIILV VVTTIVICIV SYSISRLIVA PLQTVSRMME RAKNGDLTVH 240
  241 GEYNAKDELG VLVSDFNEMI TGLRTNMKEV DNNIQLLFQH ADGVVSASEV SSSAAEKITM 300
  301 DIEEVANGAE SQMQAMEQTA GAMEELTQGM QSIVNTSSSV NELSAQSALD AESGNKLMKQ 360
  361 MIQQMNIIQN SVHSGVKQVE TMKEQSEEIV KIIDVMQGIA SQINLLALNA AIEAARAGES 420
  421 GRGFAIVADE VRKLAEQSSN SAKQIEKLIT QVMGTTSHTV HMMERVDNEV QAGTQVVMDT 480
  481 EKVFGKITEK VHQVSEQIQT VSMSTDEIAA SSEEISASAE DMAQISQRSS DRTDRVKESI 540
  541 QQQEKSVQEI SVSIEHMHNA AGKLKQIVAQ FTLQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle