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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30253920, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSKKFTLLL LSLLLFLPLF LTNFITPNVV LADSQKQDQK IVGYFPSWGI YGRNYQVADI  60
   61 DASKLTHLNY AFADICWNGK HGNPSTHPDN PNKQTWNCKE SGVPLQNKEV PNGTLVLGEP 120
  121 WADVTKSYPG SGTTWEDCDK YARCGNFGEL KRLKAKYPHL KTIISVGGWT WSNRFSDMAA 180
  181 DEKTRKVFAD STVDFLREYG FDGVDLDWEY PGVETIPGGS YRPEDKQNFT LLLQDVRNAL 240
  241 TKAGAEDGKQ YLLTIASGAS QRYADHTELK KISQILDWIN IMTYDFHGGW EATSNHNAAL 300
  301 YKDPNDPAAD TKFYVDGAID IYTNEGVPAD KLVLGVPFYG RGWKSCGKEN NGQYQPCKPG 360
  361 SDGKLASKGT WDDYSTGDTG VYDYGDLAAN YVNKNGFVRG WNDVAKVPYL YNATTGTFIS 420
  421 YDDNESMKYK TDYIKTKGLS GAMFWELSGD CRTSPKYSCS GPKLLDTLVK ELLGGPITQK 480
  481 DIEPPTNVKN IAVTNKNSNS VQLNWTASTD NVGVTEYEIT AGEEKWSTTT NSIAIKNLKP 540
  541 NTEYTFSILA KDAAGNKSQP TSILVKTDDA NTTPPGGNSN ATFSVTSNWG SGYNFSIVIK 600
  601 NSGTTPIKNW KLEFDYNGNL TQVWDSKISS KINNHYVITN AGWNGEIPPG GSITIGGAGT 660
  661 GTPAELVNAS ISEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle