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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28919359, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCLKPAELL LALPQKESSL AAGIGSALAL PAARPNGGVE AAAKYTATMG SATIEAGSRP  60
   61 MNVREISEKA KQYDWNPRIG FKFWARAANT IHHEGQIYLQ EGSIAQAYMF LLRYCTLVLE 120
  121 DMAKHPEAKL PENRSLMKQL NARINTVVEQ LEQLKPQIEE AYAKWQQLTA SVQDSREKRL 180
  181 STSSQYSRHA ANDAALSWNH LSQAKILDAG SNQELAVDLA REALLKRRRR RRQESADEDE 240
  241 RMHRPPSGYR EERGYDAGRR QQYPTPPLTH HRYSEDDDLR RQMEATRRQL DRSGGYGVSE 300
  301 TDNGTSDTDS YQSVNYHYPA IKPTSTYTYD YPKPASRPES PKPQPPLPPK VIPFERPVPV 360
  361 TRPPPPPPRP RKGSGSLNRD SRRNVMLPSQ TIRLVTDEDD VDDKPARPPK VSEPLPPPPE 420
  421 TQPKEANKVT FRPVAYLESG EPLRSVFLPS GLRRRFLELA RGNTIRELEM CGILCGTLIN 480
  481 NALFITCLLI PEQECTSDTC ETINEEAYVT YCIENDLLVL GWIHTHPTQT CFMSSRDLHT 540
  541 HAGYQTMMKE SIAIVCAPRY DPSYGIFRLT DPPGLPHIIN CNTPGVFHQH AIPSDEIYCS 600
  601 ARHAPGHVFE SSRVDFEVVD LRPEGSKVPP FKRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle