YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30254309, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLLKIIMV IVLAGSISGC SELEEIEERG FVVGAAYDIV KKKKSNPIMK GTYQMVLPSK  60
   61 LAQQGGQGDG DSENYINVSA KADSVFEQIR IIAKKISRTL FFPHIQVIIF SDKLLANPYV 120
  121 LQNTLDVYFR DHEMRRNIRL FVSKKNAESI LKQSAKPENL PAQYIDMLAE HPPKNAQMIE 180
  181 AARIGEVQGK MIADRSFALP LLGLTKQGVQ MEGAALIRGK DNKCVGTLSG EQTLGMNYVI 240
  241 GKKIGGFFTV RKKNQLITYE IHKLRRKIQV STENATKPKF DIHLSTEGIL AELHFNEPKQ 300
  301 VMNEKFLKKE ISKEMKKRIE KSIQLVQKKY KVDVLELGEV YKRHNYKEWK KISKNWDQGQ 360
  361 NYFSNAEINV HVDPTIEHSG SALPKKVK

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	388	0.99