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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30254196, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHSFQTVKF AFWNVLTFQL AYKLLAAIVF VPLFGIIFNK LLYFGGYANA TNDELLAFLK  60
   61 TPYGILAIVI LSLLALFLIF TEFAVLIIIS YFAHKRQKVR LRPILYKTVT YLPTLFTYCL 120
  121 PGFILYAVVL LPLLNMGYET ALIPQIQIPN FITGELFKTT MGQVGYYTFF AVVAYLNLRW 180
  181 IFVLPIVVLE QKPFRVAARK SAKLVKESFF KVLFFLVGFF ISIGIVYVLF LGIYLLCLWG 240
  241 VYEFTNPKGT FALLAESTMS VFLTSTLYLF SFIVTPFYIM AITRLYLQKV PVEDVLLEEG 300
  301 LDYSKTKADK CFFQKHRWKF IGVYIVGIIT AGMVVAFIVT FITNTYKEPI IMAHRGYISK 360
  361 GVENTKEALQ GAIDAKADYA EIDVLQTKDG ELAVIHDLKL KRLANANVHV SDLTMDELRQ 420
  421 LTLSQDGFSG QISTLDEIIK LAKGKIKLNI EVKLHGGEKD FVNKVLKTIK DNEFEKQCVI 480
  481 QTLHYPLIKE FKRANPNIKV GYILYASRAH LKNVKADFYV AEEYMLNKKL VKEARKLNKP 540
  541 IYVWTVNDME SLKGYYKLNV DGIITDYPED ARETIKMLKE QEEEESDLFD KITETTDDLF 600
  601 SKLFISYPAA S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle