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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30260253, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFEQVFFRW GFIIVVIGFL LGRAYILTNI LPFALPFFAA VYVMKRDKMP LAFLALMGGA  60
   61 LSVSIDNLFF TFASIFTFFI YNIFFSRFTR KTVGLVPFQV FISALTAHLV VVYFAQQTVT 120
  121 MYDLLVSTIE AGLSFVLTMI FLQSVPLLVE RKGKQQALET EEIVCLIILL ASVLTGTTDW 180
  181 FVYDASIQHI FTRYLVLVFA FIAGAATGST VGVVTGLILS LANVSSLSQL SLLAFSGLLG 240
  241 GLLKEGKRIG VSLGLLIGTS LITLYVDKQT NIVTTLIESG VAIAFFLLTP KLVMDRIAKF 300
  301 MPGTQEHSQD QQQYLRRMRD VTANKINQFA NVFAALSNSF SVYGYVEEED KETEADLFLS 360
  361 TITAKTCQTC FKKDQCWVVN FDKTYDYMKQ IMSETEEGTL QHNRKLVREW DKHCVRGKKV 420
  421 TDLVAGELDH FYEGQKLRKQ MKENRRIVAE QLLGVSKVME DFAKEIQRER ENHQVQEEQI 480
  481 LQAFRDFGVE IEHVDIYCLD RGSIDIEMLI PVASNEHGEC EKLVAPMLSD ILKENIVVKH 540
  541 EEKSSYPNGH SLISFGSAKT YSLDTGLATA AKGGGFVSGD SYAMMDLSVG KYALAISDGM 600
  601 GNGQRAHMES KETVKLLQKI LQSGIDEEIA IKSINSILSL RTTEEMFTTL DLAMVDLRDA 660
  661 SAKFLKIGST PSFVKRANNI LKIEASNLPM GIIEDVEVDV VGEQLKTGDI LIMMSDGIFE 720
  721 GAQHVENHEL WMKRKIKELQ TEDPQEIADI IMEEVIRSGD GYINDDMTIV VAKVKKNMPK 780
  781 WATIPIVGMQ AQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle