YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85099060
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTGFFHHF GTFLLLVATV LLIVTCISAP VINDISIMKV DFGRLHVGGF KRVTFGTFGW  60
   61 CEIADGQADS CSSSHVGYNP ANVMRMIEGT SFSNYAERTT KALTKAMILH PIACGLNFIA 120
  121 FLLALGAGLV GSFLASLVAA LAFIVTVVIM IIDFVTFSII KSNVNDDDSG SRAHWGSAAW 180
  181 TTLAAAICSL LGMIILFITC CSARIHKRRN RDLEPKNDYG IAAAPPRRRR WF

Type	Start	End	Confidence
Cytoplasmic	1	9	0.55
Transmembrane Helix	10	32	0.77
Non-Cytoplasmic	33	106	0.78
Transmembrane Helix	107	130	0.82
Cytoplasmic	131	136	0.49
Transmembrane Helix	137	160	0.81
Non-Cytoplasmic	161	177	0.86
Transmembrane Helix	178	201	0.91
Cytoplasmic	202	232	0.87