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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32412634, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLTSKTRR TIKPHILRTS CLTLISNAHP RPAPLYNPAR LYSTEQPDKP SSPANALELK  60
   61 DNDFKPAPGK QRLHPRALRG KTTKRRGGAP NTQPLTNFLK DLETGSLNAG QQEQATTTTP 120
  121 EAREPTTTDG AQDGTPEAAE GDSKKKGKQA KKSKLKPSSS PAAVASDPKL MQRATAVLRK 180
  181 VLEKELRAEQ ESVGSEADKD KSKPGKKKKQ KSTETKPTEP KSLIRRLQTN GKLKPSGVLE 240
  241 KTTAAAAITP APDTSAATTK KQTKETSAEP KPRSPEDLQW PPPGRKLHVR RVDPDLIKMI 300
  301 PVHKEQPPVP GLSYGLDRAL FNPGVYHMQD PRSRVWNFDP YLARIMPIQE FDFNALKQYI 360
  361 TSSKDTTLID IAREAKKKYT GSTSSMTSTL AHFHYLLSSW RPITTGMMSQ SFRADSTNFT 420
  421 RIMRAPSAAF LHWKDGVYAI DADKEFDTAN VLSMLGKSME KLLTLPKEDF EKYRKTKSHQ 480
  481 LTEEERDSPE SYHYTKLGDF MMRSQLDAYD PRIPGTGMFD LKTRAVISIR MDAKGFQKGL 540
  541 GYELRHRNGN WESFEREYFD MIRSAFLKYS LQVRMGRMDG IFVAFHNTQR IFGFQYIPLT 600
  601 EMDYALHGTR DTSLGGKEFK LSLHLLNKIL NRATAKWPEQ SLRLHIETRP TDPPLMYIFA 660
  661 KPVTPDEIEK IQGANKKIIE KFERDMMGLE PKEEKGEGVA IEKTNEEAVE EATEESVGEP 720
  721 EAREEVTTAD VWEDMVVKVE EALENEEHGV TSVREAIEQA LRSSGLLEAS APEEARRYLD 780
  781 ELLEALMSAE SGKADESAAD NAVEESASAV STEEATEVKI ENGQAAEAEE EPTLKDLVLR 840
  841 LASQVKADRS EVVKGKAEDD VSAAAADDSK LRKFETILSE LISKSRDTTE TGEITEGGEQ 900
  901 TTASTDASAT SKTQNPEDEI ASLDETVHTK TNDNSILPET KPELLGMILT IRNKVNGEYV 960
  961 ERPEHLRRTD KWEVEYSLED MPALRAENIY KMVIQRRCKT LDDQEDRDKA WYEMFQGALH1020
 1021 KYTRKGRMHR KKEIELGKAR PVHVYGMDKP LDWESVFGEG KEEGMSYRWY GQEAENVETG1080
 1081 TIELSPEEVE EDDGSLPVEE VEGAEEGDAE VDVAAFSEEK FDDQPEAVEQ QQQQQQQFEE1140
 1141 KSEEKSQEKS D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle