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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32411453, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENATLTPTL YPLIEAVDPL QIELAMTMTR GQENRFRMTP DRDRSPSPDI PFFLDDSDHH  60
   61 PSFPLRELLH QAVLPAGTNS STTTRGQPTP TSSHSSQDFE VSLIGSTQDR DRVNTLPGRD 120
  121 EPVQTLPGNA HGLLQQLHLH EETGGDNADS DNDSTPSEPV SEEFMTTRQP SLLSVAPGRD 180
  181 SPSYGAITSA PARATSAPQS EGGEPSARAE SRSESSARFR TGHDPTGRSS TGDSCDGSVG 240
  241 RSSERLSLSL QKSGEWGGSM TMRGIEGRFE AEVPLEGESL LDHIDELNEF DETEEDPADN 300
  301 SPYAQVRASV APTDNTTLSI NTPRMWTLAV LFSIIGSSTN LFFSLRYPSV AITPVIALLS 360
  361 THPLGLMWDF FLKRADDPPE EYVDGCRTDS ANIPVDHPTD EQPRVFVPWE KRSKLDQLRL 420
  421 WLAQGRWNEK EHSCVYVSSN VSFGFAFATD VIVEQTQFYK QDAPILYQIL LTLSTQIMGY 480
  481 TFAGLTRGFL VRPSGMIWPG TLMSAAMFTT IHKQENHVAN GWKMTRWKFF MVVFLAGFLF 540
  541 YFVPGLLFPA LSYFNVITWF APKNVVVANL FGVVSGLGLF PMTFDWAQIA YIGSPLLTPF 600
  601 WAAMNVVGGL VVVMWIIAPI AYYSNWLYSS YMPILSAAVF DNTGQVYDVS RILTEDFVFD 660
  661 REAYSKYSRV FLPITYVLGY AVQFAGLASL LTHTICWHGR DIWAQWKQTL GEMHGAEPKG 720
  721 SYEPVAVSTE GLSRTWSRLS SRSSFTRSNS STENIMNRED VHNRLMRRYK DAPMSWYLIT 780
  781 CILMLAIGIF VVEYYPVHLP WYGLLLALGI CSILFIPIGI IMAVTNQHSS IYLICQLVAG 840
  841 AVFPGRPVAN MVFVTYGYIS SAQGIKFAAD LKLGHYMKIP PRILFSVQMV ATIVSSLTQI 900
  901 GVLNWMFKNV PGLCTPEALN GFTCPIARVH FNGSILWGVV GPSEFFGPGA TYRPLVWAFA 960
  961 VGAVLPIPLW LYARKRKDSI VRKLNLPVLF GSLGWIPPAT GLNFSVWALV CYVFNYVIKN1020
 1021 RARAWWAKYT MTLSAALDSG LAFGIVVVFF GFIYPGVVKG FSWWGTEVYK QGCDWQACAY1080
 1081 QAVPEGGRFG PDVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle