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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85094135
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSNAARAS QLSGSTAFNS STSLSSLTSS ATAVTPVNGQ VVATTNIINQ RADASRSLYQ  60
   61 ICLSLKQRLA QVPGFEGYLE QLQREQENGH DGPVEALWKL LRTGLPLLTI YNALQPEKPL 120
  121 HVDQRPNETE ARRSKRAIME FVKACLSDLD PPVTECFIVA DLTGEDTTGF VKVTSVINYV 180
  181 LDLAEKRGLL LQTLPYPEDD ITQPGSKMTH RDYIVRELVD TERKYVQDLE NLHDLKRTLE 240
  241 HRSVIPGEFI HDIFLNINAI LDHQRKFLIR VETTNSMPQA RQEWGSLFVT AEENFGIYQP 300
  301 FIANQRKAAQ VATQVFDKIQ EAGHPVACDF NTLDGFLLKP MQRLVKYPLL LKDLLKKSED 360
  361 EHTKEDLAAG IAAAERVLMK ANSAVDKNIL EEALQDLIHR VDDWKSHKVD NFGSLLLHGV 420
  421 YTVITGKSEQ EKDYEIYLFE NILLCCKELT TTKAKDKKDK TRSSVPKLRN KFAKLQLKGR 480
  481 IFMTNVTDVV AISKPGSYTV QIWWKGDPGV ENFMIKFQTE EMMKKWAAGL EEQRKQNTQA 540
  541 APVAPDQAPP NFAWLASQGN GLENPYKDEE EDEDIYNAAA PTVAMPGTMP RNGSSTSLRQ 600
  601 RSATSDSLAG MARAPPPRFP LPQAPAPLNV GLQPSPAVRA GESYFSPVAE SPASSRTSTA 660
  661 SGIFAGAGSG YPFPKTGTPQ GWQEDSNRYT APAMPRAPSR DGPSPGTGRN PRGPSMPVMP 720
  721 RGDNSQFQQA RSRSYSTPDI AGQAAARINQ TGVPAVPGIP AHLTHARHDS NIPRSNTGSP 780
  781 ANDLPLRTQT GSPGRERKNY GGQLNQFPPQ PIRQGTPGSV TGFPPPSGPP PPGMAPLAPT 840
  841 EGTRNITPSL GTAPIMSGQN PLSPTDDDML PTQLKVKVHC DTGNYITLVV LYDITYEKLI 900
  901 DRIDNKLSRF TSSSIGGGNL RLRYRDEDGD FVMIESDDDI QIAISDWREG LRNPDSAGEI 960
  961 DLYCEGELLE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle