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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42522758, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFWILPFLI FASLTARAED VRIQIWHQMI YGHRQVLAEA LEKFEKENPG ITVQATYRET  60
   61 EELRSSFQSA AMGGSGPELV YGPSDQVGPF ATMGIVRPLD EVLGSDYFQN FDPLAAPVYD 120
  121 GKHYMIGDAV GNHLMLLYNK KFITTPPKNS QELIELGKKM TVDTNGDGKI DRWGLVFNYT 180
  181 EPFFFAPFIP AFGEAFLKAD GVTPNLNTTA LKDTFQFILK LRDQDKIIPK ECDYETANAL 240
  241 FKENKAAMLI NGDWSWGDYQ QAKVDFGIAR IPMISETGKW PSPLVGTKGY SLNANMKSEA 300
  301 HYEAAVKLLK YLTSTPVQLL FAEKVGVLPS NLQARESDIV KNNPLLKISA DIMEVGTPMP 360
  361 VTPEVRAVWD SLRIQYQKVL AGSLQPQAAA EQAQITAEQQ IRDMNEVLTP GVGATVLKVI 420
  421 FGIGIVLLIW LTRNSLVAFF KGFRGPQRFA YYMMLPAFIG IFAVIIYPFF YNIAISFSNF 480
  481 SLRTFQDWSL VGFHHYIAAL SDPRFYSLFL KTVIWTVVNI VFHVSIGVFL AVIINQVIAG 540
  541 KGFWRALLII PWAVPQYITA LTWRAMFNQE YGPINIFLQQ FLHMSPVQWL SQPTTAFAAC 600
  601 ILTNVWLGFP FMMIVALGGL QSIPSSLYEA ARLDGANAWQ RFRHITWPLL LPVMAPAALL 660
  661 GSIWTFNNLN VIWLVSNSGE PGDQTHILVS YVYKAAFNLY RYGYAASVSV IIFLILVIWG 720
  721 LGSLKSQFKK ETK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle