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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39985018, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTIISMLCC TLAAAVPAAA ENLILDEIVV RGQKESPREE SLTIREVRES PARDMGEALR  60
   61 QVEGLSYVRK GAIANDVVIR GLQRDNINVL IDGVRLYGAC PNRMDSPAFH FDFAEVEQIR 120
  121 IVKGPYDVEN AGSLGGLVDA VGKKPKKGFG SDLSFTYGSY DSINASGTAS YGTDRLDGLL 180
  181 GYAYKYSKPP ESGDGKRITE IYPATSNNRY RPGSIDSTAY EINTGWARFG INPTDNSRTE 240
  241 FSYSYQDADH VLYPYLLMDA DYDRTHRFNW SYRIEKLSPL VSEVKLQAYW NRVKHLMDDR 300
  301 YRETSNPDNA ALMYRTFLTR NYFMSTLAET ETWGAKMNTS LAVGSGTLKA GIDYYNRGWD 360
  361 ATNTMLMRNG TDWVYGDSPM IPDVTIHNTG MFLEYTVPLA ERLKLTAAAR GDLTRAEADR 420
  421 LTAGRIATLY QPYYPGRTLS ADTDFGEASG NLQLTWTPIT GLELFAGFGR GIRTPDPQEL 480
  481 YTGLQRMGSN WVGNPLLEPT VNNQGDVGVK YATDSYYVNA SFFYGYLHNY INVTDLPDPD 540
  541 GAGPLLRARS YRNVNATLWG GEFGSQFSLP ANFFLKASLS YTRGNNESDD RPLSEIPPLR 600
  601 GTMALRYDVD SWFLEVAENF ADRQDRVDAA LQEQETAGWF TTDLKGGFTY GGLSVYAGVN 660
  661 NLFDKYYLSH LSYQRDPFST GAKVPENGRN YYLTLAYRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle