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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997447, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAHADYGK LSVEETLEAL GTSRERGLPQ EEIAARLKEY GPNEIPKKEE SLFQRISRRF  60
   61 WGPIPWMIEA AALLSALLRK WDDFTIIAVL LLTNAALDFW QESKALNALK VLKNKLAKQA 120
  121 LVLRDGKFTS LDARNLVPGD IIKVKIGDMI PADIKLIDGE FLQADQSALT GESLPVAKKA 180
  181 GDIAYSNSIV KQGEMIGVVT ATALGTFFGR TVALVAKAQK EEKSHFQKAV VHIGNYLILI 240
  241 TLFLAAIILI TAMFRHENML EILRFTLVLT VAAIPVALPA VLTVTMTVGA MNLARKQAIV 300
  301 SRLVAIEELA GVDVLCSDKT GTLTQNRMTV SEPKAFAGHT VEELMRAAAF ASKEENSDPI 360
  361 EIPIFEYLRK TGGLDDMPAY RHLKFTPFDP VSKRTEATVQ LADTTLLVTK GAPQVILELC 420
  421 GERVDRQAIL DAVEELAEKG YRTLGVASKR PEDGMFDFLG LIPLFDPPRE DSKSTIEEAV 480
  481 KLGLQVKMIT GDNLAIAKQI AAVLGIGTTI FDARDLRGAS TRELVQLGAI VARAVYLKMS 540
  541 DGITEEEAQH FARGVVKELE REFERIELPE GYVKRHESEI IGVIESASGF AQVFPEDKYL 600
  601 IVEKLQKSDH IVGMTGDGVN DAPALKKADA GIAVSGATDA ARAAADLVLL APGLSVIVDA 660
  661 VKGARVTFER MKGYSIFRVA ETIRVILFMT ASIVVFNFYP VTAIMIIILA FLNDIPILTI 720
  721 AYDNTKVDNR PVRWNMTEVL TLATVLGVSG VISSFGIFYL AEEYMHLSPA VVQSFIFLKL 780
  781 VVAGHSTIYV TRTEKHFWQK PFPSPLLFSA TTLTEILGTL FAVYGVFLAS IGWGNALLVW 840
  841 GYALAWFVLN DFIKVWTYRY LRRDANSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle