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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997245, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDTPTSIS GQGKAYFHVK GITCLDCAQK FEKAVNALPR VVSATLNTMS GRLTVEGSVD  60
   61 LEEIRRLGEE ENYVISPESR QDVSADEHIG KPDWEMRRAL ISGIALAIAY GLERFGGPAI 120
  121 VFIPVYLTAM VLGGWGNFRK AARSLPRGNF NMSVMMSGAI IGAIAIGKYE EGASVAFLYA 180
  181 ISEMLEAWTM DRARRSIRQL MDIAPKVALV RRDSRETVIP VEEIVIGDVM IIRPAERIAM 240
  241 DGIIVRGESA INQAAITGES MPVEKGVGAE VFAGTLNTHG SLEVKVTKLV QDTTIARIIH 300
  301 MVEEAQTRRA PSQAFVDRFA AIYTPVVLAL AVGIVIVPPL FLGHAWVPWI YRGLALLVVA 360
  361 CPCALVVSTP VAIVSAISNA ARHGVLIKGG IYLEEAGTLS AIAFDKTGTL TKGKPVVTDI 420
  421 VPLGETAEGE LLQMAANLEA RSEHPLAASI VKAAKDRGCT ITPVVDFTAV AGQGAQGTIS 480
  481 GKMVYIGSPR LFSEKNISID EIVPQAERLE SEGKTVMILG SAERIVGIIA VADEVRSASA 540
  541 GAISSLKRAG IRHAVMLTGD NTATAKNIAA QVGVDEFRAE LLPQDKLTAI DGLLKEYGKV 600
  601 AMVGDGINDA PALALSTVGI AMGSAGTDTA LETADIALMS DDLAKLPFTI LLSRKALAII 660
  661 RQNITFSLCI KAVAILAVFP GWLTLWLAIL ADMGASLLVT LNSLRLLRVN DIH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle