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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39996778, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEWHHISIE DALTRLETSL TGLDSDEVRR RLAAYGPNEL EEKARRTPLV MFLGQFTDFM  60
   61 IIVLIGAAVV AGIIGEPGDA APIITIVVLN AVIGFAQEYR AERAMAALRE MSGNYAAVLR 120
  121 SGEHLSVPAR EIVPGDLVLL EAGNVVPADV RLAEAVHLKT VEAALTGESL PAEKLSEQLF 180
  181 DSDLPLGDRR NMAYKGTVVA YGRGIGIAVA TGMGTELGRI AAMLQQEAGT KTPLQRRLAD 240
  241 FGKRLALAVL AICAVVFTLG LLRGEPLLLM LLTSISLAVA AIPEALPAVV TITLALGARK 300
  301 MVRQNALIRR LPAVETLGSV TYVCSDKTGT LTLNKMTVEN VWPGDLEGTD AGSSGVSAAT 360
  361 LFTTALVLCN DAREDSEGGL VGDPTETALL AYGRACGVIR TEIEALHPRV AELPFDSERK 420
  421 CMTTFHRDGD TVLAFTKGAV EVLTARSVAM LTNNGEVPLD RQEIERVTVE MAARGLRVLA 480
  481 LAMRRWPYLP DRLESDEVES DLIFLGLAGM MDPPREEAAE AVAQCRNAGI TPVMITGDHP 540
  541 LTARIIARRL AILEDDGDAV LTGRDLAELS PEEFEARVEQ IRVYARVAPE QKLTIVKALQ 600
  601 NRGHFVAMTG DGVNDAPALK RADIGIAMGI TGTDVSKEAS AMVLLDDNFA TIVRAVREGR 660
  661 RIYANILKFI TYSITSNIGT LVAITLAPFF GLPLPLLPIQ ILWLNLLCDS LPGLALAGEP 720
  721 AERDVMSRPP VDPKEGVFAG GRGYYAAGYG LVIGAAALAF QAIALRMRLP WQTMVFTFLV 780
  781 LNRMAVVLAV RSDRTSLLRI GIMSNRPLVG AIVITFCLQL AVVFTPALNP LFHTEPLSVR 840
  841 ALVATVVLAM GMVLLSELQK GVLRWRRGSS R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle