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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39996661, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLLYGLTL FIVVALTLAS PAGAQDAIAT HPIQPAGYSS IKVFDRNGRF AGRILPEKRY  60
   61 WVPIDRIPAF LQKAVVAVED ARFYEHSGID VRGIARALVK DVVKGRLAEG GSTITQQLIK 120
  121 NKYLSGEKSI ERKLEEARLA MDYEKKYSKK QILEMYFNEI YYGRGAWGIA QAARVYFDKN 180
  181 PEELTEAECA LLAGVPKNPG RYNPLGKAAD VGRRRDVVLK RMTDLNMISA RQKQKLRSQR 240
  241 VAVTPPDQAS WYLAHIRNLL VERYGPQVIE AGGLEVTAAM DLNLQKLAEK TLREGVKRVS 300
  301 PDLQGALMSL DPATGDVLAA VGGVDFAKSS YDRAFLARRQ PGSAIKPLIY AAALEKGITA 360
  361 ASVWDDSPVA YVRGANQTWK PRNYGGEQYG ELSLRKALAY SNNVITVKVL ETIGVPYFVE 420
  421 IARNLGLSLR SPNDLSLALG TDEVTLRDLV SAYTPLANGG LRAEARTVLR IYDKRRRAWT 480
  481 DNPPAVTQAI SPAAAYVTTQ MLKDVMVYGT AKSLRKFSQA RPAAGKTGTT DDYRDAWFIG 540
  541 YTPGVVTGIW VGHDKPRPGG KGFTGGTVAA PIWERFMGPA LSGRPAADFA RPETVVAVTV 600
  601 DPATGYRAAP ECPEQREELF IAGTEPVAYC PAHGGELLMP ESPDLPVPEG ETREPAATDN 660
  661 PM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle