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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39996482, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMFERKRSL PADGTPAGAV TRKVALVGNP NVGKSVLFNA LTGAYVAVSN YPGTSVEVSR  60
   61 GSASFEGGSW EIIDTPGMYS ILPITEEERV AREILLTERP DVVLHVLDAR NLERMLVMTL 120
  121 QLVEAGLPVI LVVNIMDEAE RMGLEIDIPL LQEKLGIPVI GAATAKKRGL PEIRKAIASC 180
  181 DAAHHASFGY SRRLEGDIAE IAGLLSGEYT LSGKSLALLL LQRDEEIAAL VAGKEGDRAG 240
  241 AIAEKVREKT FERRESFHLD LSLERKGIVK GLLAGVLRTP EKRRVTAGER LSSWAVHPLT 300
  301 GVPLLLAVLY YGLYQFVGVF GAGTLVDFLE GTLFEEYFNP WIIGVVNGIV PWEIIRELIV 360
  361 GEYGIITLGL RYAVGIILPI VATFFLFFSV LEDSGYFPRL ALLVDRIFKK FGLTGRAVIP 420
  421 MVLGFGCDTM ATMVTRTLET TRERIIATVL LTLAIPCSAQ LGVIMALLSQ APGALLVWSV 480
  481 CLLLIFLVVG FLSAKVMPGE TPMFYMELPP MRLPQLSNVM TKTYTRMQWY FMEILPLFIL 540
  541 ASVLLWLGKI TNFFDKLVNW MEPVMAFIGL PRDAAVAFIF GFFRRDYGAA GLYDLQTKGL 600
  601 MDPRQLVVAA VTLTLFVPCV AQFLMMKKER GLKSATLIAL FVSVVAVGSG WALNRFILFT 660
  661 GIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle