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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39995883, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISRRQFLQ GGALAGAALA LSGTPGEASA DSPDLRTKGT KVTTTVCPFC SVGCGLIVHT  60
   61 KDGKVINAEG DPQHPINQGS LCPKGGALFQ IANNDKRLQK VMYRAPGSDK WEEKSWDWAL 120
  121 DRIALRMKET RDKSFKKTEL NKKDNKEYVV NRTDGMAFFG GAGLDNEECY LWTKFARAMG 180
  181 VGQLEHQARL UHSSTVAGLA ASFGRGAMTN HWIDLKNSDV IFAIGCNPAE NHPISFKWIE 240
  241 AALDNGAKLI SVDPRFTRTS SKADIYAQIR PGTDIAFLGG MINYAIQNRM IHEEYVREYT 300
  301 NATFIVSEQF DFQDGMFCAF DDQEKVYDLK SWAYSTGADG KPKRDMSMKD PKCVYQLMKN 360
  361 HYKRYDIDTV CAITGTPKED YLKVVKAFCA TGRPDKSGTI LYAMGITQST HGSQNVRAVA 420
  421 LLQMLLGNIG IAGGGVNALR GESNVQGSTD YGLLFHILPG YLKSPEFDNV DLKAYVEKWT 480
  481 PKTKDPKSAN WWGNTPKYTV SLLKAWYGDN ATAENDFCYD YLPKRMGNYS YVKIMEKMAK 540
  541 GELEGLVCMG MNPAVGGPDS VAAREALGKL KWLVTADLWE TETSIFWKRP GVDPKSIQTE 600
  601 VFMLPAASSI EKEGSISNSG RWAQWRYAAV HPLGDSRSDL HIIDEFYKRI KALYLKDGGA 660
  661 FPEPLTKLAW NYGTGHEPDV HLVAKEINGY FTKDVTIKEK DKVLEFKKGD QVPMFKYLQD 720
  721 DGSTVSGCWI YCGSYTNEGN QMARRDPSDP TGLGLFPKWT WCWPVNRRII YNRASVNPAG 780
  781 EPFNPKRPVI AWDALEKKWK GDVPDGPWPP MKDDKEGKYP FIMLPEGHGR LYALDMKDGP 840
  841 FPEHYEPVES PAKNLLSKVQ TNPVVKVPSN VSSDTSKFPL IGTTYRVTEH WQAGAMTRSL 900
  901 PWLVELVPDM FVEISETLAK QKGISQGDMV KVSTERGSIQ AKALVTSRLK PFNVQGKLIE 960
  961 QVGMPWHFGY AGLATGDSGN VLTPTVGCAN TGIPEFKAFL CNIEKGGKAA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle