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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85102317
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPSMSLKR SLLLSALFTS SLLSTGVLAQ QPSSSTSISP SSASTSIVTM TSTASETSPT  60
   61 STGTETIPPL TIGNTDAATG PPTLLTGLPT LTKIGIPDYP APTVPPTQNA PFMKHSSLPD 120
  121 GTVFICVGAI LGAFGLAIVI WRTVIACLLH RSVERAAMAQ NLGDDKGFPS PPKFYKYSDL 180
  181 NSNPSLVGGS NTGLANNRKS RGPAPAAGTP SQSQLFFSPT AQPGDRNSTM ANNRHSTFLP 240
  241 SGFYASSAAA PMGHSHGNSI SMSNLRPMSR RPSGGSMMGQ TPPESPNVGP VMGTTTRTSP 300
  301 PRGFSSSSVN QLNRPESGRA PSAFLDDLLG DNPQAFPPPG GYNNPGYHGG HHDPRHSGRY 360
  361 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle