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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85099227
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFKRASMA GAGPKSTSSS AMMAGGGHSK NGSILNALRA TTMIDTKPVL PAEILVTILD  60
   61 YLPVSDLLRF ARTSRRMREM VYDDTRWVAR LRSMGVWDEA EARRRFEEVM KRRREAAERA 120
  121 ERERLAAAAA ATGTTGGSMP IGRGQPFPGQ SLELFPGLQQ QYPTPPPVIT TTLFDAGEEE 180
  181 LRRKRIAEEQ KKREEAIQAA AQRRAMEEME GLQDGFETMK VGGGQGGLLP TAPQKDPFSD 240
  241 PEALLNVIKN ARSIRGHARQ EYGKIYGALA PFYFDLAKAK SHTDPVVFRV FRDPERQAQM 300
  301 LANLRTFAKS DWAAGWRQRE EKLATMAGIF ESAVLHEFET GYEFWDVDGR MHKYAHVLDL 360
  361 LNGGTAAVEL FIHKHPIFTD KEVLANPMDC VNQALADDVT LEPSRRFFEV LTAKVNEQAD 420
  421 IIQRVFPKPA EVFWLLMGKI RDDILTDYVT PLFDETHERS LAAYVKAVSG LFEQTLQFFR 480
  481 TVNAPKNEKN AKEQEELAKE YALKVFEQHL DLYLADELDY FTQQAEAEVG EWEKKLSEQD 540
  541 ATAESFYMGS FTNRQADKKD FLTSFKKVVM MPVSALPSLP LGSPFASKPA TTPTTATTAA 600
  601 ANGGELQAPE NPEQSHPVSP SLAAPVTVDR TGSPLPDKAP TDELAAKAAL MTSRLEGIKS 660
  661 LFSIEIALSL VHMAKSSLGR AAVFIQLGGQ AGGEAREQCE AIFVALLRIL GSRHIKPGFD 720
  721 KAVAHLSQYN PREVSHHDKG GVAPLVTFIE LVNVGDLISQ MIDVFYEQQL TTPKIADRND 780
  781 FLDPAGLAKK KFEQMLDESV AAGLNKGIDV LMDEVEYVCA TTQQPTDYNP AMTTDPFNDA 840
  841 ASISGMSVTT EGTTSTTTNS SNNNNRKSRY KSGTPSIWSL PSLPGTPPTP GGSSGTTTNS 900
  901 LGPQDIGPTA TALRIRDLVA SHTSMLTGST DKSMLDVFNG EVGLRLFTAV CKHLKRQRIS 960
  961 TEGAIKLIAD VNLYYEYIRT LKNQDLLAYF KALRELSQIY LIDAKHHAKE MATIIADNER1020
 1021 FSGVFRAEEV YEYAERRADW YNVRKEVERA MYGLECLVM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle