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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32470954, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATMAISLAG AGVFASRMDH PQVQRAILIM STTITSRPFS HRIPSAIESK LRRIRLRHAM  60
   61 LIIASAMAFS IGVLLLLMIP SMLIDWMFPF ASPLLRITLT GITIVATLTT AAYWLIGPLR 120
  121 QSWQWLRAAN AVDDNVPELE ERWSTVASLS TQDRSTMSAT QRAMANQVTS EAVAMERMVQ 180
  181 PRRIAPPIKI RPGLLLAASG IVLFAIVFAI SPSRVSVLLK RFWFPTQNIT ATQLASVTGE 240
  241 PFVPRGDSIE LVTRASGVVP SSATISVMQP DGQIEEHRLT ADETSPDTWS HKMRVDEDVS 300
  301 YRVRAGDAQT EWLRLQTIDF PEIDQIEFGV EFPAYTKRAP ILLDRLPRRV KVPQDSVLRL 360
  361 AIKPLDSLKK LSISLTDPEI PTPDTTVSDD GKTSLTDMDI RELSPEADGW YRLQLPLIDD 420
  421 VLLRPTLLSP HDLTNQRRLF SRIDVIEDKA PVARVITPND ETAVAEDEII EIKFEAHDDH 480
  481 GIEKAELVIY DESQRDADGN AKVLHVQPIP LGDQANQKHL IAKTKLDLKE LGLTEGQEIS 540
  541 YSIRVTDNKP ETDSLATKPN GRQAESESAK SESSKSGSPK NESLAKSENT QNPDATRKGD 600
  601 SPQSADSKNS DSKNSDSKLA DSNPADSMQA DSEKAEAKQA EAKQAEAKQA DSEMDDSDPA 660
  661 NRKSGETQPN ENNPAGDEPS EADPTDSTNA DLKLADTGPA DRDDAAKNAG DQQSDAKTKP 720
  721 ALMDTANQSM PPESDNNSQN SKTEPSGADR SSKPAPNAIA AADSPAQAGA TKPKPPGKPT 780
  781 NPSGDQPRNS SDAKKSNPKN PDANKMAQSD SSKSKPQPKV PATKVAKESK PQPKAPAKQM 840
  841 ESQNSTVSHV TSSNRQRKQK GQNATTGRRR LKITDKLSAI AEAEERPGDE LKMRESVVEI 900
  901 DQMLAEIETG LRKLVERKIA DSDRSEQFRR LDTGLGNVED FVAKLREQTR ESQYAFVGLQ 960
  961 MVDITRSHVT PARDRAFAGS QRAGSDNADA TMGLQHVVRA RELLGALLKR FDRVKREKKL1020
 1021 KKEMDEAITI YEVYLEKRRQ LMREARQNRN PLDRKMAIVE VDQAYLDRLA EVLELRRAMM1080
 1081 DEFAAMLGDD PRLLSRYMEL VQRRQKSLRN ELSDLSQRQY DLTEEVMNWL QIDTTQRPDL1140
 1141 WTIIIELRLS AAEDLAKDAA QLAERIQKQL PLEVNAESGT AANLIRTANQ ISATARNIQF1200
 1201 EADELFANSN GEAKNQDSTT GARSLIDQCE RLFSQLDRLQ FENEGNDALA LYVESRIQET1260
 1261 RVVADQTDVW ADLHRNIQNN DYGGLVQTEQ YRLAVSTQLL RVEMLDMEPN LTAEFLRTVN1320
 1321 TDLPGEIKDM IRTLHRLMET ITYNQIAASI RSGHRNLESG NEQQQLATDR LTEAEELFDK1380
 1381 IRRTVVTHLD EYDPRDPNIG DLRDPTLDEF LARLEREPNI ASQLGIPNRR TNLRVRADTL1440
 1441 LWQESASGAA LAASQVAADQ RAKQAMKMEK PKRKNRKPGD KSSEELSKEQ REQAKQAQDM1500
 1501 LAKTLLEIEK QKENGDPSDA ERQRLDEMAE KIKGLMNQDG DNASAERAWQ QIVQADEAKE1560
 1561 LMQAIANGEF IADQQWNRLL STLDDGLWQV QGNRPPEAYR KAIEQYQDQL RVLMSTID

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