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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29655054, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDFIIALA GNPNCGKTVV FNALTGSRQR VGNWPGVTVD KKYGYFQHQG YKVKVVDLPG  60
   61 TYSTSVTSEA GAIDEKIACG YLLSDEADII VNVIDGSNLE RNLYLTLQLL EMNIPTILAV 120
  121 NMMDIVKQRG LVLDLKQLSK RLGCPVVGLV ARQNKGIEAL KDGILKIKEK ADRSAQNAPR 180
  181 TSAREARLGS RLRGNDGGRF ILPLPAEIDQ AVRLLTQVMT IDDACHAKWL ALRLLEGDHF 240
  241 AKTLVDQSVL KLAEREILAI EAKLGEEPDI LIADARYVFV NQLARAVTQL VKTPRQTLTQ 300
  301 WIDRIVLNRF LGIPIFFAVM YFMFLFAINI GGAFQGFFDI SSTTLFVDGL AHLLTSWYFP 360
  361 VWLTAILASG IGKGINTTIT FAPVIGGMFL FLAFLEDSGY MARAAFVMER FMQTLGLPGK 420
  421 SFVPMIVGFG CNVPAVMGAR TLENRRDRVL TVMMMPFMSC GARLAIFALF ASAFFPQGGA 480
  481 TIIFLLYLAG ISVAVLSGLV LRRTVLPGKP APLVMELPPY HIPRFSSLWR HMWQRLKNFL 540
  541 FRAGRYIIPI CVLIGVLNSV TVTGKLVGDA SQHSLLSAVG RLVTPLFSPL GVKKDNWPAT 600
  601 VGLTTGILAK EVVVGTLNTL YSEQGNLTQQ SASQFNFWGG LREAVESVPQ NLSQLGDAFK 660
  661 NPVAASEAPH DMNKTAYGIM YKQFGGKKAA FAYLLFILLY FPCVSTMAAM RREVGKRWAL 720
  721 FSVLWSTGLA YALAVMCYQW LTVVEHPALT LIWSAVLVTA LITAIVSLRQ YASRDQKTSP 780
  781 LPLAEKDGSI AAGRVFKERN LWRLRPRFLK KRDGEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle