YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24350548, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQRRQFLKT SLQAGGAFIA GVGLSQSAFS MGVSGLVTLD DKTQTSVGGS MNNRFWPNGE  60
   61 QLVISISMQF EAGAQDKNAE GPFPPMEQGY PDTITPSWYD YGMNEGIPRL LRLWRKHHIQ 120
  121 VTSHMVGRAA ELHPQLAKQV ADEGHEIAGH GQTWTPQFSM SPAQERASYI ESINTLEKIT 180
  181 GQRPIGFNAF WMRHSTQTLN ILQDLGFIYH IDDLSRDEPS ITPVQGKPFA VVPYTLRNND 240
  241 IGRFGGNTAM TAADFLQELK DEFDMLYQEG VSQRRMMSIS VHDRIGGTPG LANALDKFIQ 300
  301 YAKEHSKVGF MRKDAIAKWA LAQKDTPTNP ARTF

Type	Start	End	Confidence
Signal Peptide	1	30	0.87
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	334	0.99