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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24349751, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTIAATAI LFALGLSACS QGPKTVNTPA PSSAEQPTPA LLTQAQLQQF GDNLGVTYRV  60
   61 LTNRPDDNCD KAAAEGRCFV AEIDFVPEVD LIGKEWAIYF SQMRPVQSVE GKEFSITHIK 120
  121 GDLYRIAPTE AFSGFSKGVK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVKQ 180
  181 DPETRMEVRP YVEPFTDMVK QYSRTDADKL APATASQLFS NNQNVSEDAS LAVNTIIPTP 240
  241 KTVVLHSNDK VVSLSSGIKL DVASVSSPSA EKQSFKTDQV AAALERLARL GVKESEQGLV 300
  301 MKLSWRQGAE GSYLLDIKPD GIKIAAGDAA GFSYALSSLT SLIDVQDLRV NAMTIEDSPR 360
  361 YPFRGMHIDV ARNFHSKAMI FALIDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS 420
  421 KRCHDLEENT CLLPQLGSGP FAESSVNGFY SKQDYIDILK YANARQIQVI PSMDMPGHSR 480
  481 AAIKSMEARY RKLLAQGKPT EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYQFVDK 540
  541 VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPECLSFV ANNDKGVKSI EDLGAYFIER 600
  601 ISNQLAEKGI EAAGWSDGMS HVRPSYMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS 660
  661 NPEVLYFDFP YEADPKEHGY YWASRATNAH KVFSFMPDNL VANAEQWTDL QNLPFEADDR 720
  721 ARTDEKGKKS GPREQGKNFA GLQGQLWSET IRSNDTVEYM IFPRLLMLAE RAWHQAEWEV 780
  781 PYQYQGALYN QSTGHFTAAM RDAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAKIQ 840
  841 GGKLFANVAY PGLKMEFRQA NGQWQAYQAG QAVTAPVEIR AIAADGIRKG RSLIVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle