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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374479, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKSLGTLT LNMVAETGSF VEGQTKAERA LAKTEAAAAK QKAELNRLLG QIDPLVAEYS  60
   61 KLDKMEQQLR RHRESGSLQQ AEYDTYSKKI AQMRTEVGKA GVEYDKTGMS AKQMAFATRG 120
  121 LPAQFTDIAV SLQAGQNPMT VFLQQGGQLK DMFGGVGPAA KAMGGYIMGL INPFTVAASA 180
  181 AGVMALAYYQ GSIEADRLRN ALILTGNSAG TTTDQLMEAA KRIDAISGTQ RQASAALAEV 240
  241 ANTGKFTASQ IELVGLAAVK MENTTGKAVA DTVAEFVKLA DDPVKAAEEL NKKFNFLSAS 300
  301 TYEQIVALKE AGKSTAAAEL AFSAYSNAID QRTKEITGNL GSIEKAWKAI KSGAVESWDQ 360
  361 ILNIGRADTL EQQYAALSKR IEDLRPKTKQ GEWGYGLARE ELKALEAERD SVMALMKTER 420
  421 DRSAEQAKRA KLNQDSIEAQ RAIAKVTEET LTNEQKRNKA IKEYNDNIEK VRKADPNSAL 480
  481 LNADKIKRDL ASIEEKFKDS AKTTKAFADD AATSYLMRLR ETQAGLQGQL DRNTKLTQSQ 540
  541 KELLQFEQQI ADIKNKDVLT AQQKSLLAEQ SVIRAQLEKN VALDEELKKR NEALRLQSYS 600
  601 ANLAANLAAE QQRNADKLAS FGLGDKAQQR LGDRQSIERD IERAQGKALS DNLAGRTTDE 660
  661 EYQAQLVMLK QNLSDRLAAQ NEYYIALDAK QADWTNGARS SMQNYIDAAA DMAGQTEKLF 720
  721 DSAFGGMTDA LTDFVTTGKA DFAWLTKSIL ADIAKIAMQK AIAGIASSIF GGFSEGGAVG 780
  781 YSSGGYTGAG GKYEPAGIVH RGEVVWSQRD VARAGGVATV EAMRKGHKGY DNGGIVGGAA 840
  841 YNGVPASATA GAGVVHVEVN IDQSGNATTT ADTPALSQFG SELGKFVEQK YRQLLANDLK 900
  901 PNGQIGRTMA GGYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle