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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374372, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLQLSMSA FGPFASTQTI DFTELGDNPL FLINGPTGAG KTTLLDGISF ALYGKTTGNE  60
   61 REGSQMRCDM ADDNLLTEVT FSFKLGNTAY RIRRVPEQDR LKKNGEGSTV QKSEAQLFKI 120
  121 APDGTETLLV ASKVSEATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ 180
  181 LFQTHIYKRI EDILKAKAAD IRALVKEQRA RRDGILQTAE LASDDELAAE FSRIEPELAA 240
  241 AIVAKERSTA AHLQALKQHD SAQQRFAEFT RLSELESQAT LLHEQQADIA AQTARLNVAK 300
  301 QAQRLKPLLD NALSREQEAT IANDQRSRAQ MVLDAAKLAL AKAETEAQEL NGLEPRLRTQ 360
  361 EQLANSLTSL APQLAEFADV EQALAKANIL LQQTKVQGQE TKTALASLVE QRSTYENQLP 420
  421 ALQQQSERQL ATAQALQQQR HLLELFKQWQ QICVKVAQTE EALVLAGLQG KTLNAQHQAA 480
  481 LSDYKSLQLS WFQGQAAILA RELKLEEPCP VCGSIEHPHP ATSHDNLPTD AQLQAAQNAE 540
  541 VNALEQLSKA RAEYRGLQKQ LEAQQLQANE LASSLGDAVE LPLESHIQQL EELTRHAKQA 600
  601 EVATQALQQL QQQIKALQQQ ELGLTQQLEL ERERYHQQEG EVARLSGQLA EKALRIPDEY 660
  661 RSLTALNQAI NDNQQQLEKT RGLIHALRTA QQQASEHCVA AQTALEAAIQ RCHSADELQA 720
  721 LALGDLNSQL HLAGFTDRDA LGAALLADEQ MQALGERIET YQRQCALNQS QLAQLKTQLS 780
  781 DVSVPDLDAL EAMLAEKRQQ LNIAEVAWSQ LNTRFSLLKQ TQTQLSIVDQ KAKALEDEYA 840
  841 IIGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK 900
  901 ASGLELEVED AYTAKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF 960
  961 GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQINT RIDLLKTSHG SEIKVILP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle