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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374006, gi|...
Protein type: Transmembrane
Type Confidence: 0.43
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPFTEQPK QDCGQLKQHS SSLTLKPIAL AITASLIGLA SLSACSPIAD KSASSTTSNA  60
   61 VSNNEINTAS YNIAPGAPGK APTWAFSGKT GIGTSYEPYT QGQYQDSQQN PISRVWFSIA 120
  121 QGILTETMFG LIHNAQLKEL QFVITGNGFV DTEKDNTISS IEYLDTDANG RPQSLAYKII 180
  181 NRDVEGKYQI EKHIFTDPGR DTLVMRVTFT AFEAGITPHL YVNPHIDNAG ANDIGRIDHQ 240
  241 ALIAYTAAPH SSVMTVKSDI NFVRATTGFE GISDGLADLA DNGTLDTLYS ATSAPDNRTQ 300
  301 GNIAFTASYP EVTPNQPLNI NLAIGFGHDE LSSLTNAKAT LNAGYDAVLG QYNAGWRSYL 360
  361 QSLPAIAGMA KSTTDNGKLL YTSAMVLKAQ EDKTYAGALI ASLSNPWGDT VSAITPSTGY 420
  421 KAVWPRDFYQ CAMAFLAMGD TQTPKVAFEY LKKVQVSDKT SGFSGTPGWF LQKTHVDGQI 480
  481 EWVGVQLDQT AMPIMLGWKL WQAGGLSQTE LSYWYQEMLK GAADFLVSGG EVNLDWNHTP 540
  541 VTPPKTQQER WEEQAGFSPS TTAAVIAGLV TASDIAKAVN DLNASQRYLD SAKTLNQQLE 600
  601 KHLVTTQGLL TDSQGVSTPY YLRLSPHGEP NTATKLAANN GKAGLDQRQI LDAGFLELVR 660
  661 YGVRGATDKL INQSLALVDN TKLEDNLRLK YSFTAKDGSS VPGFRRYGND GYGEDTVTGA 720
  721 NYAESGGNSD NQRGRVWPFF TGERGHFELA LASAKGELTG TKGQQTKQQL INTYVQGMET 780
  781 FANAGMMLPE QAWDGVGNAT RYQYRLGQGT NSATPLAWTH AEYIKLVRSM NDGQLWDHYP 840
  841 IVPETLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle