YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24348331, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHPSCFHCN EPVLTGTQFV TQINDRDELM CCPGCQAVSQ AIVDAGLLSY YKFRTEPGNK  60
   61 QTALVPEALN QFSAYDLPEV QQDFVHSEDN SDSVSLSIDG ITCAACAWLI EHKVKQLSGV 120
  121 RQVMVNSTTQ RAMISWDKQQ VKLSDILGQI SRIGYQAAPY QVDEQELTTK QNSRKFLLRL 180
  181 GLAGFATMQV MMFALALYTG YFTDLDVQYR DYFRWVSMIF ATPVVLYSAQ PFYFSAIRTL 240
  241 LSGKLNMDVS VSIAIGGAFT ASCFATVNGT GEVYFESVSM FTFFLLLGRY FEQKARQKAS 300
  301 VSSSNLHKLV PLTAHLVNEQ GQEEIPAKKL RLGDIILVKP GEMVAADGCV VEGHSSINEA 360
  361 MLTGEQMPID KPVDSQVFAG TINLEQPIKV KVTALGQDQL VAEIIRLQEL ASNTKPAVAM 420
  421 LADKLSRYFS GTILTIATIT YFVWLQISPE DAFWVTLSVL VATCPCALAL ATPTAVTCAT 480
  481 AIFTRLGIIT RKAGVFEKLP QIKHVIFDKT GTLTCGTLSV SEVKCHSHLA IEEVLAIAAA 540
  541 LETGSLHPIA TAFAAYLTPD VVANQVHHEV GFGVKGLING TEYRIGNAQF TGALVNPEFI 600
  601 NQQIWLAWGN DDSLEVLATI EIKDNIRVDS KETVGILKQQ GCRVSIASGD SSGHVHQLAK 660
  661 ALGITDVHSG LTPADKLALV KKLQQSNPVV MFGDGINDAP VLAGADLSVA MGSGSAIAKN 720
  721 SADLILLGDH LSRFTQAVRV AKLTTQIIRQ NLAWALGYNA LILPLAVTGH VAPYIAAIGM 780
  781 SASSLIVVGN SLRLLRIKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle