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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373713, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQLMTIQA TASQTTALQA IVSKTMPSNL NTAEADTSLA QNSTEQTDSF KPVVYQIFTR  60
   61 LYGNKNPTNN PWGTISENGV GKFNDIDDSA LKSIKALGVT HVWYTGVPHH ALIADYSVIG 120
  121 VSSDDPDVVK GRAGSPYAVK DYYNVNPDLA INPAKRLQEF QALIERTHKQ GLKVIIDIVP 180
  181 NHVARNYHSV TKPQGVRDFG EDDIQTVEYA KHNNFYYVID NNQVHGFEVP DLPKSLKPLD 240
  241 GESHPLSNGQ FKEIPAKWTG NGSRLAKPDM NDWYETVKIN YGVRPDGSHD FPALPPRYAT 300
  301 LSAEQHYAFW QQHNHELPNS WIKFNQISQY WLAMGVDGFR YDMAEMVPVE FWSYLNSHIK 360
  361 HSYPDAFILA EVYNPALYSD YIQLGKMDYL YDKVDLYDTL KAIMAGQKST ELIAADQAKV 420
  421 QDIGSHMLHF LENHDEQRIA NAAFLGTLSG NASTDAVDPR YALPAMVVSA TLSTSPTLIY 480
  481 FGQEVGEAAT QNLGFGHASR TSIFDYAGVP AHQRWMNKGK FDGGQSTATE LALRAYYQKL 540
  541 LNLSTGKNAP ALLGQYYSLD AANRSARPST MDSHGSATGY DDSTFAFVRF EANSTNKMGQ 600
  601 KLIIVSNFSQ VQAKSLFLKL PKSLIEQWQL TDATYQLKDL LEDNAAQLIV KQGEGHIQVQ 660
  661 FAPLSSAIFE LAN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle