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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24347659, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLITTAVL AASFSLTAGM VSAADAPKTI DQLLQQVKVD RAAEGKVNSK REQEFQAERG  60
   61 DKAALLKREK DALAAEKQRG KDLNQAFLDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG 120
  121 DFAGKLASSN VSAQYPNRDK FIADLGARKQ LPKIEELEKF WQEQLFEMAE SGKVVKFQGS 180
  181 VTAIDGSVKT TTIHRVGAYN LTAEGKYVVF NPELNLVQEL SIQPEGYQVS SVKKWEQITS 240
  241 GTAPFYIDPA RGVLLNIYTN KASFEDRLES GGTIGYIILV LLALGLLIAA ERFIVLAVIG 300
  301 AKVKNQAKNV DKPGNNALGR ILKVYHENKD VDVETLELKL DEAILKETPA LEARIPILKV 360
  361 IAAIGPMLGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALVTTVQGL VAALPLMLLH 420
  421 AMLVARSKSI TQILEEQSAG IIAAHAEKRA D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle