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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24373290, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGGRSSRR AFKDKAAQIG VTIGGTMVFV ALLLIFFYLL YVIKPIFDSA DVTPVKSVSY  60
   61 QHAEVATLMV GADEQNEVMY RVAADGQVDF YIVADGSLLS SFTPPLPAGV SVTSAAVAAP 120
  121 SEQRFALGLS NGQALIVGIE FGLSYPNDKR LITPKLRYSA GETPITIDES GSAIHHLAFS 180
  181 FSNDKITFAY QDNNDTWRLS RLEGQENMMT EEIEWTTTSS LIPDAPKKAA HQLMTPDQRQ 240
  241 LMLQMGNKVF IYNIRDAENV DLIQVIDAEK DKSKVNNIAL LAGASSILVS YDTGVVTQYF 300
  301 QVNGPKGRLY QEIREFSDLA PVASIAAEFY RKSFAVVSPE GELSLLYTTS ERELFDKTFD 360
  361 LKNPGAIGFS PRSNSLVVEA NNKLNIFQVE NSHPEVSWSA LWNKVWYEGY PEPQFVWQST 420
  421 SGSDDFEAKL SLMPLAFGTM KAAFYAMLFA VPLSIAGAIY TAYFMSPKVR GIVKPTIEIM 480
  481 EALPTVILGF LAGLWLAPLV EEHLPGLLIL LILLPTAILV SAYSWSKLPG KWKQRLPEVY 540
  541 QELMLIPVIC FVGWFSFAIS PMIEVALFDG NTRQFITNEL GITFDQRNAL VVGIAMGFAV 600
  601 IPNIFSIAED AIFSVPRHLS NGSLALGATP WQTLTRVVLL TASPGIFSAI MIGLGRAVGE 660
  661 TMIVLMATGN TAIMEWSVFE GMRTLAANIA VEMPESAIGS SHYRVLFLAA FVLFVFTFIF 720
  721 NTIAEVVRQR LRDRYSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle