YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24347248, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSAALINSG GSLPYSVSAG KAFPLGATVD DGGVNFALFS AHATGVELCL FDAQGKVEIQ  60
   61 RIALTEQTQQ IWHLYVHGLC AGQLYGYRVY GPYEPQLGHR FNPHKLLLDP YARQLVGRYH 120
  121 HHIANFGYEL DNPNEDLSFS TLDNAAYMPK CKVVDIRPLL AAAESQAIRP LSPHRNPLPI 180
  181 EQCIIYEMHL KGFTALHPEI DVPLRGTFAG LASKAAIDYL VKLGVNCVEL LPIQAFFSEP 240
  241 FLLEKQLSNY WGYNSIGFFA PEPSYLSSED IIEFRTMVDA LHGAGIEVIL DVVYNHSAEG 300
  301 SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNL NHPRMLQLVL DSLRYWVKVM 360
  361 GVDGFRFDLA ASLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP GGYQLGNFPV 420
  421 AFSEWNDRYR DTMRRFWRGD HGMLPEFARR FHGSGDFFEH SGRPPAASIN FLTSHDGFTL 480
  481 KDLVSYCERH NWANGEENRD GHHANFSYHY GVEGASNDVS VLVLRARQQR NLLTTLFLSQ 540
  541 GVPMLLSGDE TGRTQGGNNN AYCQDNPMNW FDWSSEGMDK HLLSFTQQLI ALRKRFPLLC 600
  601 AKRFIHEQLV ARSLESPSES PLGAAKFLTQ PSARLDWFSR QGKPMTKSLW SESMCRSLCV 660
  661 VLSGDLTAGI DVAGDNSFQA LLLMVNADEH PLAFTPPVFE HLGPWQCLLH TQTEPQYLTP 720
  721 TEPLDAQSSP TRYLLQDRSL MLFHADFIRN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle