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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24347166, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRSFLKMS AAMGCAATVT GCNSGSSDVN VVPPKPPVGD EVQTWSSCLV NCGSNCPIKV  60
   61 FSRDGIITRI ETDHETNDEY GNHQIRACAR GRSLRSRTYA PDRLRTPMKR VGKRGEAKFV 120
  121 PISWDEAAST IASEIQRIAS SYGNKSILKH YGTGAYYGFA SSACFDRVLN LNGGFLKIYG 180
  181 NYSWAQQNEA AAATGFASTS GSSLTALYDS DLFLGIGYNP SEMRQSGSGE GYDFLKALEA 240
  241 NANLEVIMVD PRYTDSMAGK ESQWLPIRPG TDAAFAEAIA YEMISSGWVD THSKAFLDKY 300
  301 CVGFDKASLE KLVAEFTASG DPKKTQYLPY IDVEDNYRNY ILGEGKFADN GPRTPAWAAK 360
  361 ICGISEANIK SVASKIMNAK APFIVTGAGV NRHANGEQAM RACYMLSFLT GKVGQPGVSN 420
  421 GALPYQGSLN RAGMSGGSNP VKESISFFTW AEAIERGHEM TARKDGIRGT ADLDTPLGAD 480
  481 IKAVFAINSN ALINQHSDCN GTAKILEDDT KCELIVVCDC WMTASARYAD ILLPDTTWLE 540
  541 SNDLVNDSYA SGIMGYLVAM KAAVKPMWES ISMFEMGRLI AAKMGKEAEY TEGKDEAAWL 600
  601 EELYQKTRTN SANTDAQPAF PNSYAEAQKI GVFRAFSKTP VLALDSYING GKAVSTPSGK 660
  661 VEIYSLSMAQ KGKDWIFNPN VKGDYITAIP MYQPTWEGYD DEDTKDDYPL QLMGYHTKGR 720
  721 THSSYHNVPW LREAAEDAVW MNPADALGRG LRGGDKVQMW NDRGTVELPV RITPRVAPGV 780
  781 VALGQGAWYQ PDIARIGRSG HPIDVGGCIN TLTRYQPSPF AKGNPQHTNR VQIVKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle