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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346142, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTHTTKKAP AQRKAKRSRG LFGHIWSLTW KLALIGLAVV TFYGIYLDQI IARKFEGQKW  60
   61 HLPAQVFSRS MALYPGAAVS HPQLMAELKL LGYRKVANPR EVGEFSASST KIELWRRPFL 120
  121 HPEGDQPEQR VMITFDSEGV SAIARMEDKR QLAVFHLEPV LLDRMITGDG EDRLFVSTEE 180
  181 MPKPIVQALL LVEDRSFYEH HGVNPFAILR AAFVNITAGR TVQGGSTLTQ QLAKNFFLSS 240
  241 ERSLLRKVRE ALMAVIIDFR YSKDEILEAY LNEVYMGQDK SRAVHGMGLA SQFYFGRPIG 300
  301 ELTTAQQAFL VAAIKGPSYY NPWRYPERSL ERRDLVLRLL MESGELNTAQ YKVAVESPLG 360
  361 LRNANKPVHQ KLPSFYALVK QEVNQRYGDA LLKQSGVKIY TTLDPMAQEA AEIAVTQTFK 420
  421 SLDKGNKSLQ IGMVVTDKYT GGIAAMVGDK TPGFDGYNRA VEIRRPIGSL IKPFVYATAL 480
  481 APNSQFTLAS PLKDQPITLK NEQGKTWSPQ NFDKTFSGQV SLLTALKKSM NVPTVNLGIA 540
  541 VGVDAVVTTL AKSGWEEPLN EYPSMLLGAV NGSPLMVAQV YQTLADSGAY RKLTTVTAVL 600
  601 DSDNQPLPVT RSAKEQAITP DTDFLVQYAM QQVVRSGTAT RLGNAFPGVA LAGKTGTSND 660
  661 SRDSWFAGFD ERNVAAIWVG RDDNGKTSLY GSSGAMAVYQ AFLKERPPIG LRSIPPSGVI 720
  721 KGYFDRDTGE AKEAGCSNTE ALPALRGTYN PAKNCGEPLQ WWQKILGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle