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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24346071, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQREEQVER HVLQIDLLLE SSIRAVKSLR DVAVDHLRLG ELVRKERLPQ YGKFNESGQY  60
   61 FTLEPNYAKG GKPFTNMGRI TGAGSLDGRS DKFYQELEML FELSLSFPVA KEAAPKASAI 120
  121 YYLSRQRMMS YFPWTNDDER FRDELLNKKQ FQYATPAMNP QRSVFWSEAY VDSTGKGLLT 180
  181 TLGVPVYLDD EFMGSINLDM TLASLARQIR VYFKMPGTVI LLDQQNNILS HSDFDGSDIN 240
  241 RVYHISQRIP SELHSLPESE LFDAHEGIIR NGYYIHSVAL HNAPWRLLYL QNEDDLFQDS 300
  301 VEKLQLTFIL VVIALSVLVT IVHWQTRRSF VSPASRLLSH LEGCSQEPRK PPEKITPGWE 360
  361 PWFLLVSRIF EENKQYTHHL AEQNKRLDKL VARRTERLKD ATERREREYA LLRSLLDSIP 420
  421 EAIVFKDKEG NYLGCNKAAE RMLGYTESEM IGLSSEDLTS PEMGIRIRAE DAQILKDRTP 480
  481 LRYQEKVELA GKPVLLDTLK LPFYNRRGEL QGLIAVWRDV TREYESAEQL RLSEERYHLA 540
  541 MDAVEDGLWD WYLDSEHIIC NPSYYSMLGY KPNEFPALVS AIDQLTHPDD RIRVEEYRNQ 600
  601 YLENPVDAYE IEFRILGKNS SYHWVLSRGR VVEFTTDGQP KRMVGTHKDI TRHKSNEVAL 660
  661 LEAKQDAELA NLYKSEFLAN MSHEIRTPMN AIIGMLQLAQ RTSLTAQQKD YLEKAGFSAQ 720
  721 SLLRIINDIL DFSKIEAGKL ELERVPFPLD KVLDHALDLN ALKAQEQGVE LLLYAPVTAG 780
  781 LILKGDPLRL GQVLINLLSN AVKFTQSGEI ELGCEDVGER DHRITLKFWV RDTGIGISKD 840
  841 QQEKLFDAFA QADGSTTRKY GGTGLGLSIS KHLVSMMGGK MQVQSELGVG STFSFTISFE 900
  901 IAEEAKIEPL VVPEKLNNLR TLVVDDNPTA LQIYSALMRD FHFEVDTAAS GAEALYKLSR 960
  961 DPIDLLLLDW MMPEMDGSDV ISAIDTMVAE GRIAKRPIII MMTAYAAEPL LHEVDSANVF1020
 1021 AVLQKPFKAS SLFDEIIAAF ADEPRLNVVQ PIAEVAVEEG EHTGLVLLVE DNFINQQVAT1080
 1081 ELLKSAGYEV VVAGNGQIAL DIVDSRPFDA VLMDIQMPVM DGLTAARALR ERYSADVLPI1140
 1141 IAMTAHAMSG DREKSLAAGM NAHITKPIVL TELFETLTHW IKHKHNHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle