YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|225626979, gi...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLEQTSRRF PWGVLIASGI ALVILLSLGT WQVERLMWKE ALIASTEQRI HEPPLPLAEM  60
   61 EKIYRQEGTV EYRPVTVSGT FLHQGERHFL ATYKGEAGFY VYTPLMLEDG RFVLVNRGFV 120
  121 PYEKKDPATR PAGELAAGPV KVTGLARDPL SVKPSFLVPD NDIAKNIFYW KDWAAMAESA 180
  181 GLPDLGRVVP FFVDADSTPN PGGLPIGGVT IIDFPNNHLQ YAVTWYGLAL ALIGVVGTWL 240
  241 WRYRKSGRG

Type	Start	End	Confidence
Cytoplasmic	1	9	0.76
Transmembrane Helix	10	31	0.78
Non-Cytoplasmic	32	221	0.93
Transmembrane Helix	222	241	0.97
Cytoplasmic	242	249	0.86