YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22294126, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASATHSSS RWRLLRNHAL LIGVAVLITL LIRVFVAESR FIPSESMEPT LWPGDRIVVE  60
   61 KITYRQRSPQ RGDIVVFYTP PLLQTLGYRA DQALIKRVIA TAGDTVAVHD GRVWVNNRPL 120
  121 EEPYIAEPPI YTLSPVTVPE NMLFVMGDNR NHSNDSHIWG FLPLENVIGR AIACYWPLNH 180
  181 AGKISSPAT

Type	Start	End	Confidence
Cytoplasmic	1	16	0.63
Transmembrane Helix	17	37	0.67
Non-Cytoplasmic	38	189	0.96