YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18389124
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHHVKLIYA TKSRKLVGKK IVLAIPGSIA AVECVKLARE LIRHGAEVHA VMSEAATKII  60
   61 HPYAMEFATG NPVITEITGF IEHVELAGEH ENKADLILVC PATANTISKI ACGIDDTPVT 120
  121 TVVTTAFPHI PIMIAPAMHE TMYRHPIVRE NIERLKKLGV EFIGPRIEEG KAKVASIDEI 180
  181 VYRVIKKLHK KTLEGKRVLV TAGATREYID PIRFITNASS GKMGVALAEE ADFRGAEVTL 240
  241 IRTKGSVKSF VENQIEVETV EEMLSAIENE LRSKKYDVVI MAAAVSDFRP KIKAEGKIKS 300
  301 DRSITIELVP NPKIIDRIKE IQPNVFLVGF KAETSKEKLI EEGKRQIERA KADLVVGNTL 360
  361 EAFGSEENQV VLIGRDFTKE LPKMKKRELA ERIWDEIEKL LS

Type	Start	End	Confidence
Signal Peptide	1	34	0.53
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	402	0.99