YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DIPPS_PYRFU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILGGEEVK GVILAAGYGS RMGEKPKGLL KIAGREILYR TIKNLEKNGI KEFIIVTNER  60
   61 YLQKFEEFVK ENNLQNVKLA VNRFPEKGNG YSLYVAKDFV KGKFVLVMSD HIYEEKFYEL 120
  121 ALRGEGLIVD RNPKFVDIDE ATKVKIENDR VVDIGKEIPS WDGVDTGFFI LDDSIFSVIE 180
  181 DILKEKEVVE LKDVVKRARL KVSYVDGLYW MDVDTPGDLK KARKLIVYSS VKGVGDGFIS 240
  241 RYINRKISTR ISALLVDHIT PNKLTIVTFL FGIFSGLMNL ISVPLAAILY QISSIFDGVD 300
  301 GEIARARMQT SKFGGFFDSI LDRYVDFTYL LTLAYVTIRE PIWWVIAGIA IFSSAMVSYS 360
  361 TERFRGAYCA DAYKVVPALR KIPGKRDERI FVTMIFALLG LIKPLFALLA AWSTLRVIIT 420
  421 IYLVWRDVNG

Type	Start	End	Confidence
Cytoplasmic	1	265	0.94
Transmembrane Helix	266	289	0.88
Non-Cytoplasmic	290	340	0.91
Transmembrane Helix	341	360	0.90
Cytoplasmic	361	389	0.96
Transmembrane Helix	390	412	0.90
Non-Cytoplasmic	413	430	0.83