YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50404321
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEALLFLS LIFLVFVSGC IHHSTNQQLS SKQQVPEVIE IDGKQWRLIW HDEFEGSEVN  60
   61 KEYWTFEKGN GIAYGIPGWG NGELEYYTEN NTYIVNGTLV IEARKEIITD PNEGTFLYTS 120
  121 SRLKTEGKVE FSPPVVVEAR IKLPKGKGLW PAFWMLGSNI REVGWPNCGE IDIMEFLGHE 180
  181 PRTIHGTVHG PGYSGSKGIT RAYTLPEGVP DFTEDFHVFG IVWYPDKIKW YVDGTFYHEV 240
  241 TKEQVEAMGY EWVFDKPFYI ILNLAVGGYW PGNPDATTPF PAKMVVDYVR VYSFVSG

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	297	0.99