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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB23B_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRGSRFLLS RASLYHRLRS DHHHHSFSSF IKRSSIQRSP AINAFFTDPS PSPSPVNARV  60
   61 FFFSTSTSTP NQDQTKTASS KKILRTISSY LWMKDNPELR FRVIAALACL IGAKFLNVQV 120
  121 PFLFKLSIDL LSSYSSSTIT DSNPYLLAAF ATPSSVLIGY GIARSGSSAF NELRTAVFSK 180
  181 VSLRTIRSVS RKVLSHLHDL DLRYHLNRET GALNRIIDRG SRAINTILSA MVFNVVPTIL 240
  241 EISMVTGILA YNFGPVFALI TSLSVGSYIA FTLVVTQYRT KFRKAMNQAD NDASTRAIDS 300
  301 LVNYETVKYF NNEDYEARKY DDLLGRYEDA ALQTQKSLAF LDFGQSFIFS TALSTSMVLC 360
  361 SQGIMNGEMT VGDLVMVNGL LFQLSLPLYF LGGVYRETVQ GLVDMKSLFQ LLEERSDIGD 420
  421 KDTETKLPPL VLRGGSISFE NVHFSYLPER KILDGISFEV PAGKSVAIVG SSGSGKSTIL 480
  481 RMIFRFFDTD SGNVRIDGQD IKEVTLESLR SCIGVVPQDT VLFNDTIFHN IHYGNLSATE 540
  541 EEVYDAARRA VIHDTIMKFP DKYSTAVGER GLMLSGGEKQ RVALARAFLK SPAILLCDEA 600
  601 TNALDSKTEA EIMKTFRSLA SNRTCIFIAH RLTTAMQCDE IIVMEKGKVV EKGTHQVLLE 660
  661 KSGRYAKLWT QQNSTLEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle