YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|197093724, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKMKIGLAL GSGAARGWSH IGVIKALKQA GIDIDIVAGC SIGSLVGAAY ACNKLSALEQ  60
   61 WVCSFRYWDV LRLMDVSWGR GGLLRGERVF NHYRDIMPVT DFDHCSRRFG AVATNLSTGR 120
  121 ELWFTEGDLH LAVRASCSMP GLMSPVEHNG YWLVDGAVVN PVPVSLTRAL GADIVIAVDL 180
  181 QHDAHLMQQD LLSVNVGNIN EESDDALPWH KRLKERFSSL TSRRGVSSPG AMEIMTTSIQ 240
  241 VLENRLKRNR MAGDPPDILI QPFCPQISTL DFHRAHAAIA AGQLAVEKKM DELIPLVRTD 300
  301 V

Type	Start	End	Confidence
Signal Peptide	1	17	0.96
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	301	0.99