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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lcl|NC_016856.1_...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFSSATVYG AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS  60
   61 NTIRALFATG NFEDVRVLRD GNTLLVQVKE RPTIASITFS GNKSVKDDML KQNLEASGVR 120
  121 VGESLDRTTL SDIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFQ EGVSAKIQQI 180
  181 NIVGNHAFST EELISHFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSYY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYITVNI TEGDQYKLSG VQVSGNLAGH SAEIENLTKI EPGELYNGTK 300
  301 VTKMEDDIKK LLGRYGYAYP RVQSQPEIND ADKTVKLRVN VDAGNRFYVR KIRFEGNDTS 360
  361 KDSVLRREMR QMEGAWLGSD LVDQGKERLN RLGFFETVDT DTQRVPGSPD QVDVVYKVKE 420
  421 RNTGSFNFGI GYGTESGVSF QAGVQQDNWL GTGYSVGING TKNDYQTYSE LSVTNPYFTV 480
  481 DGVSLGGRIF YNDFQADDAD LSDYTNKSYG TDVTLGFPIN EYNTLRAGLG YVHNKLSNMQ 540
  541 PQIAMDRYLE SMGQSADTSS FAADDFTFNY GWTYNKLDRG YFPTDGSRVN LTGKVTIPGS 600
  601 DNEYYKVSLD TATYVPIDND HKWVVLGRTR WGYGDGLGGK EMPFYENFYA GGSSTVRGFQ 660
  661 SNTIGPKAVY KNGAHTSWDD NDDYEDCTQE SGCKSDDAVG GNAMAVASLE FITPTPFISE 720
  721 KYANSVRTSF FWDMGTVWDT NWDPSSAPSD VPDYSDPGNI RMSAGIALQW MSPLGPLVFS 780
  781 YAQPFKKYDG DKAEQFQFNI GKTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle