YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI16_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTKPKPNSK FSILFTFLLL LSFLIFVARS SDVAVEAGSE EELDDLEQLL AVDEQLQEER  60
   61 PEQQSEAETV SKAQRIVVEL NGDNTKRLID GNEYVMVLGY APWCARSAEL MPRFAEAATD 120
  121 LKEIGSSVLM AKIDGERYSK VASQLEIKGF PTLLLFVNGT SQSYTGGFSS EEIVIWVQKK 180
  181 TGASTIKLDT VDEASGFLKK HHTFILGLFE KSEDSSGHDE FVKAASLDNE IQFVETSSID 240
  241 VAKLLFPNLK TNNVFVGLVK TEAEKYTSYD GPCQAEKIVE FLNSNKFPLV TKLTESNTVR 300
  301 VYSSPVKLQV MVFSKTDDFE SLAQPLEDIA RKFKSKLMLI YIDISNENLA MPFLTLFGIE 360
  361 DAKKTVVAAF DNNLNSKYLL ESDPSPSNIE EFCFGLAHGT VSAYYKSQPI PDNQNASVVA 420
  421 VVGRTFDEVV LRSSENVLLE VHTPWCINCE ALSKQVEKLS QHFKGFENLV FARIDASANE 480
  481 HPKLTVDDYP TILLYKTGEK ENPLKLSTKS SAKDMAVLIN KELKWKDQSG KDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle