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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TAGA_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKLFIFGL SLFLFLFIFN LSLSLKLSSK NNFYNHNHIN NQIHRNNEGN NKLSKLIHLH  60
   61 NDVIDTTISN RDNILFNKKS LNQKSKGSLF LVHLNGPIEK QVHNELIKQL DQLFNGGEII 120
  121 HYIPDNTYLI SMIGSDNNDN NNNNKIELIN RLKELIPSIQ WLKPLEPRLK ISPLFKQNQF 180
  181 QGDNQNEIDQ LRIYYHENSN QQSNDIDNII SESSLTLVEK ELISNNNNNN NNVLITVNLK 240
  241 NSKLSLESII YKISTRSLVY WIEPSSSKLI KHTPSNKFAH YSIQSGSAST TSTPIWDVIG 300
  301 IKGDGEIVGC ADTGIDINHC FFYDTNPIGS THRKIISYSS GNGDQIDEID GHGTHIVGTI 360
  361 IGSTTVDPSV SEFSGGAPNS KVAFVDLQVG SGNGLSIQSN LTAIYQSTYD QNAKVHCDAW 420
  421 NSNIGPFYTG VTEMIDRFQW DHPDFLVVRS AGNNVNFGFN SIYTLSQEST SKNSLVVGSS 480
  481 NQPSSTYLSS IDYWDWDFIY NSIRTSVCTQ GQSIYGITCS DVPTQTTSVD IQTQCCSNPI 540
  541 LAKICCSTEI QQQYQTNSTV YSEFIPSLFS GVGPTSDGRL KPDLLAPGSP IISSRSLGPS 600
  601 STINHCSPIT SGIATSALIA MEGSSQAAAV ATSAAVLVRQ YYRDGYFING KVNSSVGFQP 660
  661 SASLVKATLI NTASINVDST LEYSQGFGNI QLSKLITTTN AQTTSLDIPS SIEKADPIIN 720
  721 TGETNSYCFS LDSKADIDIT LVWTDPAGSP LSTFTLVNNL DLALLAFVDG ELSIYSGNSE 780
  781 TIFKNTSQVI FDQLNNVEVI RIKDAPIGSY DVKIFGTNIV IPNQSYSVVI RTSGGTTLMK 840
  841 ESECAQCFYD PNDDQSQMCE FDNGIGTQYC KDDNRFSKCV VYECNTGYVF DNGITKSCVT 900
  901 TLALTLYDIV LLGIFGIIIV GAVIFVLVCY KSKSLDQNKY FSLSKDKGGD GNSIRSNSVA 960
  961 GNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNSNGKQS NIELNSVGGG DDGTPNGDDQ1020
 1021 QQQNNSPQYD EDGRLISGQE VEISIFEVIS LGKPESKILG LALFLSFIDV ALGLAVPLVA1080
 1081 ANIFDYLYAG ETGKISTTIL TFALIIIGMI IVQFLSGILL ALAGHRIIAR LRREMFASLL1140
 1141 KQDMAFFNER KTGELMSRLA SDVSSVRSII SDSIPHMIIQ IATIGGTLIM LFIISWKLSL1200
 1201 VVLCPLPILL VFSKFYGGYI EVISVKVQDA LADAATHAAE TLFNMKTVRW FSAEEREVAK1260
 1261 FSKLISVSYK IALKMTIWNG IYSSTSGIFE QLSVFILLWY GSSLVSNGDL TPSMLIAFNL1320
 1321 FLPFITGAVT QVASLYTTYK SYKGSSYRFF EIMQRVPDIQ GEGGITRTKV RGDIQFNKVS1380
 1381 FAYSSNPDQL VLEKIDIKFE PGTITALIGP SGGGKSTMLS LIGRLYNIDG GSITLDGTNI1440
 1441 KDFNVPNLHE HISIVNQEPS LFSGSIAENI MFGKPTATRS EIIEACKQAN AHDFITAMPE1500
 1501 GYDTLIGERG TALSGGQKQR IAIARTIIKN PTVLLLDETT SELDVESEKL VQDSIDKLVV1560
 1561 GRTVIIVAHR LTTILTADII AVVSDSTISE MGTPEELLAK KGMFYDFVQI QYGKQGEELD1620
 1621 IQLPSNSRNT RNADKLRNRS ETIKQIAKIN NIIPIHRPQR GDDDNEDDEN NSGQGSSRSP1680
 1681 PPMWRQAKKN ANVNKSMLLT RRNTHVQHQS SSGGWQKGNV DDKLQRVLQK SRKKGFMNNQ1740
 1741 DHKDIKATLV LY

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